FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 16.fq |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 35407297 |
| Filtered Sequences | 0 |
| Sequence length | 49 |
| %GC | 53 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](Icons/error.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 1385346 | 3.912600275587261 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC | 643911 | 1.8185827627565019 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC | 605539 | 1.7102096214800018 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT | 601710 | 1.6993954664203823 | RNA PCR Primer, Index 1 (100% over 25bp) |
| AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 519454 | 1.4670817713083266 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 322883 | 0.9119108979146304 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCG | 314494 | 0.8882180416087678 | RNA PCR Primer, Index 2 (100% over 35bp) |
| CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCGG | 270109 | 0.7628625252020791 | RNA PCR Primer, Index 7 (97% over 36bp) |
| TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 249829 | 0.7055861959753663 | RNA PCR Primer, Index 1 (100% over 28bp) |
| ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC | 241480 | 0.6820063107330673 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 229025 | 0.6468299458159712 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC | 200410 | 0.5660132712192065 | RNA PCR Primer, Index 1 (100% over 33bp) |
| TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 196345 | 0.5545325868845622 | RNA PCR Primer, Index 1 (100% over 27bp) |
| ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC | 156596 | 0.4422704167448874 | RNA PCR Primer, Index 2 (100% over 34bp) |
| ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA | 141290 | 0.3990420392723003 | RNA PCR Primer, Index 1 (100% over 32bp) |
| CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC | 133613 | 0.37736006789786863 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 127343 | 0.3596518536842844 | RNA PCR Primer, Index 1 (100% over 29bp) |
| AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC | 121127 | 0.3420961504065108 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT | 118893 | 0.33578671650648734 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 108226 | 0.30566015813068137 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC | 104206 | 0.294306566242546 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 97093 | 0.2742174868643602 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 83442 | 0.23566328714671442 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC | 82066 | 0.23177708256012877 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 78668 | 0.2221801907104064 | RNA PCR Primer, Index 1 (100% over 28bp) |
| AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 74827 | 0.21133214433171785 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC | 65158 | 0.1840242139918221 | RNA PCR Primer, Index 1 (100% over 26bp) |
| AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT | 63341 | 0.17889250342944846 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC | 63035 | 0.1780282747931874 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT | 62192 | 0.17564740962858588 | RNA PCR Primer, Index 1 (100% over 25bp) |
| AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC | 58238 | 0.16448021999533033 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 55498 | 0.15674170214122812 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 49430 | 0.1396039917986397 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC | 48019 | 0.13561893753143597 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 47582 | 0.13438472866200432 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT | 47355 | 0.13374361787628128 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC | 46672 | 0.13181463696593387 | RNA PCR Primer, Index 1 (100% over 26bp) |
| ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC | 44740 | 0.1263581345958151 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT | 44505 | 0.12569442959737934 | RNA PCR Primer, Index 1 (100% over 25bp) |
| AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 43873 | 0.12390948679307544 | RNA PCR Primer, Index 1 (100% over 28bp) |
| ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 43654 | 0.12329097022006508 | RNA PCR Primer, Index 1 (100% over 29bp) |
| GAGAGATCAGAGGCGCAGAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 43558 | 0.12301983966751259 | RNA PCR Primer, Index 1 (100% over 28bp) |
| CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA | 42745 | 0.12072370280058374 | RNA PCR Primer, Index 1 (100% over 32bp) |
| CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC | 42444 | 0.11987359554726812 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGGTTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC | 39122 | 0.11049134871831646 | RNA PCR Primer, Index 1 (100% over 26bp) |
| GTCGCCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCGGAATATC | 38722 | 0.1093616380826811 | RNA PCR Primer, Index 37 (100% over 42bp) |
| AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC | 37240 | 0.10517606017765209 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CACGTTCCCGTGGTGGAATTCTCGGGTGCCCAGGAACTCCAGTCACCGG | 36289 | 0.10249017314142903 | RNA PCR Primer, Index 37 (97% over 36bp) |
| GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC | 36282 | 0.1024704032053054 | No Hit |
| TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC | 35968 | 0.10158358035633162 | RNA PCR Primer, Index 1 (100% over 26bp) |
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AATTC | 35646845 | 31.183765 | 213.37125 | 26 |
| ATTCT | 35691300 | 31.156473 | 212.82831 | 27 |
| TTCTC | 35679855 | 30.272224 | 206.23853 | 28 |
| GAATT | 35704115 | 25.685951 | 175.85933 | 25 |
| AACTC | 29268895 | 24.938522 | 205.8481 | 44 |
| TCTCG | 35926305 | 24.41522 | 165.14381 | 29 |
| TGCCA | 33821030 | 23.033318 | 164.80943 | 36 |
| GGAAT | 39329955 | 22.663536 | 140.71567 | 24 |
| GAACT | 32222295 | 22.578274 | 169.49014 | 43 |
| GCCAA | 32907355 | 22.458677 | 165.27528 | 37 |
| CCAAG | 32837515 | 22.411013 | 165.36171 | 38 |
| ACTCC | 26265995 | 21.751719 | 199.92245 | 45 |
| TGGAA | 35512780 | 20.463924 | 140.59435 | 23 |
| CTCGG | 35744160 | 19.457186 | 132.0976 | 30 |
| AAGGA | 32288330 | 18.645386 | 139.9526 | 40 |
| GTGCC | 34085980 | 18.554562 | 131.87245 | 35 |
| AGGAA | 31955575 | 18.453232 | 139.98303 | 41 |
| CAAGG | 32567820 | 18.27889 | 135.98462 | 39 |
| GGAAC | 31694710 | 17.788853 | 135.8751 | 42 |
| CTCCA | 21173700 | 17.534624 | 73.87964 | 38 |
| TCGGG | 35567855 | 15.922182 | 108.57899 | 31 |
| CGGGT | 35190875 | 15.753421 | 108.34701 | 32 |
| GGTGC | 34762145 | 15.5615 | 108.553 | 34 |
| TCCAG | 19556550 | 13.318703 | 60.788624 | 39 |
| GGGTG | 35238855 | 12.972883 | 89.27023 | 33 |
| CCAGT | 18683615 | 12.724203 | 60.83732 | 40 |
| CAGTC | 16894510 | 11.505759 | 60.87991 | 41 |
| AGTCA | 15857655 | 11.111514 | 62.64206 | 42 |
| TCACC | 12300425 | 10.1863785 | 74.081924 | 44 |
| GTCAC | 13848355 | 9.43122 | 60.932964 | 43 |
| TTGGA | 12988525 | 7.468656 | 91.88122 | 22 |
| CACCG | 10452645 | 6.933504 | 59.3984 | 45 |
| GTGGA | 10874515 | 5.0086355 | 20.479708 | 14 |
| ACCGG | 8727550 | 4.760898 | 47.181103 | 45 |
| CTGGA | 7377135 | 4.131686 | 21.644163 | 23 |
| ATGGA | 6917100 | 3.9859173 | 26.39257 | 22 |
| CCGGA | 6988575 | 3.812283 | 36.964535 | 45 |
| CGGAA | 5772795 | 3.2400167 | 30.59324 | 45 |
| CTTGG | 5368015 | 3.0000725 | 21.188593 | 23 |
| TTTGG | 4557905 | 2.615329 | 57.430847 | 21 |
| GACTG | 4312705 | 2.4154015 | 58.584858 | 11 |
| TAGTA | 3230440 | 2.3240159 | 92.812996 | 6 |
| GTAGT | 3988360 | 2.2933853 | 74.3043 | 5 |
| TCAGA | 3265060 | 2.287839 | 74.188416 | 8 |
| TAGTT | 3173510 | 2.2782204 | 83.60378 | 18 |
| TGATG | 3878975 | 2.2304866 | 59.160988 | 14 |
| GAATA | 3042360 | 2.1933582 | 23.03321 | 45 |
| TTATC | 2511405 | 2.1923132 | 89.17603 | 5 |
| TGTTG | 3799570 | 2.1801958 | 58.59372 | 17 |
| TTGTA | 2998205 | 2.152371 | 84.43708 | 13 |
| TATCA | 2458825 | 2.1509736 | 89.44359 | 6 |
| CGTGG | 4793900 | 2.1460202 | 11.220272 | 10 |
| CTGAT | 3012935 | 2.1066992 | 71.84553 | 13 |
| TGTAT | 2907140 | 2.0869966 | 83.05968 | 14 |
| CTTAT | 2388875 | 2.085352 | 89.05199 | 4 |
| ATAGT | 2897285 | 2.08434 | 85.1837 | 17 |
| ACTTG | 2934065 | 2.0515518 | 20.688702 | 22 |
| ACTGA | 2916630 | 2.0436928 | 71.87899 | 12 |
| AGTAG | 3545465 | 2.0430424 | 74.47929 | 7 |
| AGACT | 2902015 | 2.033452 | 72.45542 | 10 |
| AGCTT | 2868155 | 2.0054662 | 71.63632 | 2 |
| GTATA | 2737725 | 1.9695508 | 81.439095 | 15 |
| TATAG | 2736345 | 1.9685581 | 81.31789 | 16 |
| GTTGA | 3347680 | 1.9249815 | 55.963356 | 18 |
| ATCAG | 2742320 | 1.9215531 | 72.32577 | 7 |
| ATGTT | 2593035 | 1.8615052 | 73.43356 | 16 |
| CAGAC | 2722300 | 1.8579209 | 70.24532 | 9 |
| AGGTA | 3216680 | 1.8535832 | 75.61384 | 3 |
| TGTGG | 4022565 | 1.8488045 | 5.371523 | 13 |
| AATAT | 2053515 | 1.8482895 | 21.603706 | 45 |
| TAGCT | 2635795 | 1.842996 | 71.54313 | 1 |
| AGTTT | 2538700 | 1.8224986 | 65.17692 | 19 |
| ATTGT | 2533570 | 1.8188157 | 63.584965 | 12 |
| GATTG | 3084250 | 1.7735041 | 52.209743 | 11 |
| GTTTG | 3025300 | 1.7359192 | 54.7482 | 20 |
| GCTTA | 2440050 | 1.7061273 | 71.4865 | 3 |
| GATGT | 2955540 | 1.6994933 | 59.124363 | 15 |
| TTGAC | 2410320 | 1.6853398 | 47.94274 | 19 |
| AGATT | 2339005 | 1.6827072 | 63.265705 | 10 |
| ACTGG | 2977500 | 1.6675979 | 17.856653 | 22 |
| GGTAG | 3593810 | 1.6552539 | 60.08113 | 4 |
| TAGAT | 2292630 | 1.6493444 | 63.16326 | 9 |
| TGAGG | 3579360 | 1.6485984 | 60.782112 | 1 |
| TGACT | 2345295 | 1.6398731 | 41.693813 | 20 |
| GTAGA | 2817465 | 1.6235392 | 51.425396 | 8 |
| GACTT | 2272725 | 1.5891306 | 20.293133 | 21 |
| GAGGT | 3440510 | 1.5846463 | 60.827995 | 2 |
| CCGTG | 2863665 | 1.5588242 | 11.003149 | 9 |
| TCCCG | 2279050 | 1.5085471 | 15.687968 | 12 |
| CATGG | 2687875 | 1.5053886 | 6.98218 | 16 |
| GTTGG | 3205205 | 1.473139 | 18.102411 | 21 |
| TTCCC | 1746195 | 1.4430151 | 14.394732 | 6 |
| CCCGT | 2035825 | 1.3475516 | 11.919305 | 8 |
| CTGTG | 2321380 | 1.2973713 | 5.509406 | 3 |
| AGTGG | 2794990 | 1.2873296 | 9.372456 | 14 |
| ATATC | 1418370 | 1.2407863 | 18.22498 | 45 |
| CCTGT | 1730995 | 1.1763699 | 15.70251 | 18 |
| GTTCC | 1704425 | 1.158313 | 11.71573 | 5 |
| CTGTT | 1656120 | 1.1555347 | 26.974525 | 19 |
| TCTGG | 2063975 | 1.1535128 | 5.554751 | 8 |
| CGTTC | 1682300 | 1.143277 | 12.06526 | 4 |
| GATGG | 2447515 | 1.1272879 | 16.47072 | 21 |
| GCTGG | 2491660 | 1.1154076 | 6.0075173 | 21 |
| GCTTG | 1994935 | 1.1149278 | 8.44898 | 20 |
| AGTTG | 1932660 | 1.1113173 | 16.216228 | 9 |
| CACGT | 1599915 | 1.0895988 | 11.822082 | 2 |
| ACGTT | 1539530 | 1.0764674 | 12.351295 | 3 |
| GTGGT | 2197725 | 1.0100929 | 7.9194646 | 11 |
| GGTGG | 2726275 | 1.0036551 | 7.03031 | 13 |
| TGGTG | 2047135 | 0.94088036 | 8.097293 | 12 |
| AACTG | 1341460 | 0.9399657 | 19.245138 | 17 |
| TATCT | 1069555 | 0.9336606 | 14.558229 | 45 |
| GGCTT | 1669060 | 0.93280303 | 9.954361 | 19 |
| ACTGT | 1328510 | 0.92891836 | 19.093777 | 18 |
| AGAAC | 1316745 | 0.92460775 | 19.533218 | 15 |
| GCTGT | 1601950 | 0.8952966 | 6.545663 | 11 |
| CCACG | 1344405 | 0.8917779 | 11.507362 | 1 |
| GCCTG | 1632915 | 0.88887054 | 12.849978 | 17 |
| AAGAA | 1200665 | 0.8674458 | 20.22036 | 14 |
| TTGAA | 1204860 | 0.8667902 | 20.629051 | 11 |
| TTCTG | 1240795 | 0.8657474 | 6.932374 | 16 |
| GGACT | 1517355 | 0.84981966 | 13.08704 | 4 |
| AGGCT | 1506220 | 0.84358335 | 8.66358 | 19 |
| TATGG | 1442255 | 0.8293249 | 7.815157 | 22 |
| GGCTG | 1816695 | 0.81325525 | 5.7427974 | 20 |
| CTTGT | 1154735 | 0.80570024 | 18.902742 | 8 |
| TGGCT | 1441620 | 0.80569154 | 10.889635 | 8 |
| AAGCT | 1137545 | 0.79708177 | 19.743286 | 1 |
| AGCTG | 1391735 | 0.7794641 | 15.492363 | 2 |
| TTGAT | 1076165 | 0.77256435 | 20.727558 | 19 |
| GCACT | 1123615 | 0.7652216 | 18.458754 | 5 |
| CAGGA | 1336350 | 0.7500347 | 9.237307 | 12 |
| GGCCT | 1357135 | 0.73875076 | 13.008915 | 16 |
| TTTTG | 1015690 | 0.7276045 | 7.019633 | 21 |
| CACTT | 845800 | 0.7191351 | 22.388184 | 6 |
| ATCTG | 1014700 | 0.7094968 | 6.65171 | 7 |
| GGTTG | 1520460 | 0.6988161 | 15.570238 | 11 |
| AATCC | 819885 | 0.69858193 | 10.760187 | 8 |
| AGGTT | 1197845 | 0.68878436 | 19.225245 | 10 |
| CAGTG | 1224500 | 0.6858014 | 10.23394 | 5 |
| ATCTC | 801040 | 0.68107826 | 9.0635605 | 45 |
| ACCAC | 813665 | 0.6752537 | 9.072457 | 2 |
| AGGAT | 1170290 | 0.6743692 | 9.5504265 | 13 |
| TTGCA | 952500 | 0.6660053 | 19.144556 | 3 |
| GCCCA | 1001880 | 0.66457236 | 6.2901645 | 28 |
| CCAGG | 1216490 | 0.663598 | 6.857099 | 11 |
| CAGTT | 948155 | 0.6629672 | 19.39475 | 8 |
| TTGTC | 950040 | 0.66287714 | 18.71569 | 9 |
| TTGTG | 1154915 | 0.662691 | 5.6180663 | 13 |
| TTCAA | 746225 | 0.6527957 | 14.482877 | 1 |
| ATTGC | 932010 | 0.65167844 | 19.304644 | 2 |
| TATTG | 906580 | 0.65082157 | 17.018753 | 1 |
| GTAGG | 1395170 | 0.642594 | 14.903441 | 8 |
| CAGAA | 909425 | 0.638591 | 14.706697 | 15 |
| CACCA | 769285 | 0.638423 | 8.843501 | 1 |
| GTTGT | 1112250 | 0.6382098 | 16.55644 | 12 |
| CTGTA | 909320 | 0.6358132 | 5.732432 | 19 |
| CTGCC | 951915 | 0.6300909 | 18.509111 | 4 |
| TGAAG | 1085670 | 0.62560767 | 16.208841 | 12 |
| ACGGA | 1077105 | 0.6045318 | 6.0783024 | 3 |
| TAGGT | 1049350 | 0.60339683 | 17.952644 | 9 |
| TGCCC | 907970 | 0.6010028 | 6.9331055 | 27 |
| GCCAG | 1068535 | 0.5828882 | 15.732907 | 6 |
| CGGCC | 1091935 | 0.5789334 | 12.48828 | 15 |
| GAATC | 826090 | 0.57884413 | 5.736987 | 6 |
| TCCTT | 678300 | 0.575497 | 5.0897994 | 11 |
| CCGGC | 1083530 | 0.5744772 | 12.414106 | 14 |
| GAAGA | 994195 | 0.57411295 | 16.038431 | 13 |
| CCCGG | 1072350 | 0.56854963 | 12.381525 | 13 |
| TGGAC | 1011215 | 0.5663476 | 12.373201 | 3 |
| GTAAT | 786535 | 0.56584233 | 12.357535 | 6 |
| CCCAG | 847390 | 0.5620952 | 6.1974216 | 29 |
| TCTGT | 799245 | 0.55766207 | 5.555155 | 2 |
| CAAGT | 777960 | 0.5451193 | 11.851788 | 3 |
| TGTCC | 798580 | 0.5427083 | 15.620075 | 10 |
| ACAGT | 758295 | 0.53133994 | 12.603057 | 4 |
| CTTTT | 598830 | 0.5216364 | 5.1984644 | 13 |
| TCGGT | 933130 | 0.5215071 | 5.984953 | 15 |
| GTCCC | 786300 | 0.5204671 | 15.751669 | 11 |
| ACATG | 742085 | 0.51998156 | 5.5197124 | 15 |
| GTTCT | 744925 | 0.519761 | 6.7872005 | 15 |
| AAGGC | 923050 | 0.5180675 | 10.172954 | 18 |
| TGCAC | 749080 | 0.51014996 | 18.247774 | 4 |
| CTAAG | 717465 | 0.50273025 | 12.946766 | 11 |
| TCAGT | 716235 | 0.50080454 | 5.4125876 | 12 |
| TAAGT | 690840 | 0.49699825 | 13.265265 | 12 |
| GCTAA | 709050 | 0.4968338 | 14.628334 | 10 |
| GGCTA | 872455 | 0.4886328 | 9.898118 | 9 |
| CTACT | 573195 | 0.48735473 | 6.7950883 | 13 |
| TTTGT | 676275 | 0.48445958 | 7.2857428 | 12 |
| TACTG | 688165 | 0.48117754 | 5.552995 | 14 |
| CTGGT | 855110 | 0.4779033 | 5.101787 | 3 |
| AACAT | 539670 | 0.47310475 | 9.084191 | 1 |
| AAGTT | 650135 | 0.4677146 | 12.826244 | 13 |
| GAAGG | 1011660 | 0.46694487 | 9.595014 | 17 |
| CTGTC | 683990 | 0.464834 | 7.423993 | 12 |
| GTCCG | 851315 | 0.46340978 | 5.152537 | 6 |
| GGAGT | 997580 | 0.4594701 | 10.078248 | 10 |
| ACATT | 522410 | 0.45700288 | 9.1435 | 2 |
| AAGTA | 632110 | 0.45571324 | 11.815626 | 4 |
| TAGGC | 798725 | 0.4473391 | 7.6024885 | 17 |
| GTCAG | 795180 | 0.44535366 | 11.80268 | 13 |
| TGTAA | 613725 | 0.44152084 | 6.3836465 | 1 |
| AGTTC | 629720 | 0.44031167 | 12.222974 | 14 |
| TCACA | 516365 | 0.43996808 | 15.788972 | 2 |
| TGGAG | 947415 | 0.43636486 | 10.016499 | 9 |
| ATAGG | 753860 | 0.43440512 | 9.794287 | 16 |
| AGAAG | 742960 | 0.42903352 | 12.03545 | 16 |
| GGATA | 739345 | 0.42604098 | 9.336745 | 14 |
| GCTGC | 781105 | 0.42519122 | 14.907226 | 3 |
| ACCTC | 511650 | 0.4237139 | 5.0807123 | 5 |
| GAGTC | 756240 | 0.42354468 | 11.897146 | 11 |
| ATCCC | 510850 | 0.4230514 | 8.967407 | 8 |
| GCTAC | 614555 | 0.41853368 | 6.3998904 | 2 |
| CGCTG | 768750 | 0.41846588 | 5.3060355 | 10 |
| TTCAC | 486275 | 0.4134517 | 14.748463 | 1 |
| AGTAA | 565550 | 0.40772745 | 11.865178 | 5 |
| TACAT | 462705 | 0.40477312 | 7.769187 | 4 |
| CCTTT | 475460 | 0.40339938 | 5.1852293 | 12 |
| ACATC | 472555 | 0.40263984 | 7.2810454 | 6 |
| CATTC | 469350 | 0.39906132 | 9.025346 | 3 |
| AAAAG | 550340 | 0.39760482 | 5.5108457 | 13 |
| AGAGC | 703920 | 0.39507943 | 5.8674083 | 11 |
| ACTTT | 449795 | 0.39264542 | 5.0178103 | 19 |
| GTTAT | 543025 | 0.38983032 | 6.82834 | 20 |
| AAAGC | 553830 | 0.388895 | 5.1484194 | 14 |
| AACGC | 565420 | 0.385889 | 6.606557 | 8 |
| CCCAA | 461650 | 0.38311937 | 6.804545 | 10 |
| GTGGC | 847050 | 0.3791874 | 8.89487 | 7 |
| CTACA | 444605 | 0.37882507 | 8.0799 | 3 |
| GATGA | 653060 | 0.37631997 | 5.568273 | 7 |
| CACAG | 548920 | 0.3746281 | 12.455908 | 3 |
| AACGG | 663625 | 0.37246364 | 5.9264283 | 2 |
| ATTCA | 424345 | 0.37121588 | 9.1105175 | 4 |
| CATCT | 433915 | 0.36893296 | 6.737569 | 6 |
| TAATC | 420665 | 0.36799663 | 10.960106 | 7 |
| CAACG | 537710 | 0.3669774 | 6.2068105 | 7 |
| TCAAG | 521445 | 0.36537832 | 11.697653 | 2 |
| GATAG | 631920 | 0.36413825 | 9.385347 | 15 |
| AAGCA | 517505 | 0.36338788 | 5.30747 | 15 |
| TTATG | 499190 | 0.35836178 | 6.947671 | 21 |
| TCTCC | 432805 | 0.35766003 | 5.276783 | 9 |
| CCAAA | 410855 | 0.35081208 | 6.06437 | 11 |
| GTGAT | 598905 | 0.34438214 | 6.0376 | 5 |
| GTAAA | 471310 | 0.3397861 | 6.108838 | 2 |
| ATCCA | 393890 | 0.33561343 | 10.336925 | 9 |
| TAAAC | 376465 | 0.33003017 | 7.4223294 | 3 |
| CAAAG | 459620 | 0.3227415 | 5.52406 | 1 |
| ACTTA | 366785 | 0.32086256 | 6.3104863 | 11 |
| CAAAA | 361680 | 0.31774235 | 6.765357 | 12 |
| TCCGA | 464860 | 0.3165861 | 5.2889323 | 7 |
| AAACA | 359100 | 0.3154758 | 7.406614 | 4 |
| TCAAC | 361285 | 0.3078324 | 7.9184966 | 6 |
| CAGAG | 528865 | 0.29682878 | 5.5566616 | 8 |
| ACGCT | 424960 | 0.2894128 | 6.343533 | 9 |
| TCCCA | 348650 | 0.28872833 | 5.9209566 | 9 |
| TGTCG | 503885 | 0.28161088 | 5.8238373 | 13 |
| ATGAC | 383650 | 0.26882493 | 5.5769057 | 8 |
| CAGCT | 387510 | 0.26390803 | 5.213732 | 18 |
| AGTTA | 349195 | 0.2512149 | 5.6062226 | 19 |
| AGCTA | 350915 | 0.24588737 | 6.3983645 | 1 |
| CATCC | 295215 | 0.24447706 | 6.684808 | 7 |
| CATAG | 310305 | 0.2174318 | 5.201652 | 16 |
| CTTAC | 237925 | 0.20229395 | 5.830427 | 12 |
| TTACA | 195835 | 0.17131594 | 5.9389896 | 13 |